Curriculum Vitae
Personal Profiles:
Full name: Ya-Zhou Shi Gender: Male Citizenship: P. R. China
Address:
School of Mathematical & Computer Science, Wuhan Textile University，Wuhan, China
Research Center of Nonlinear Science, Wuhan Textile University，Wuhan, China
Tel: +86-15902736283 (Cell phone) E-mail: yzshi@wtu.edu.cn
Experience and Education:
Lecturer 2015.12~: School of Mathematical & Computer Science, Wuhan Textile University, Wuhan, China
PH.D 2010.9-2015.12: School of Physics and Technology, Wuhan University, Wuhan, China
B.S. 20016.9-2010.6: College of photoelectric information science and technology, Yantai University, Yantai China
Research Interests:
Biophysics, Structure Modeling for Macromolecules, Bioinformatics
Publications
1 Ya-Zhou Shi, Xiangpeng Li and Ben-Gong Zhang*, Traveling wave solutions of two nonlinear wave equations by (G’/G)-expansion method. Advances in Mathematical Physics, 2018, ID 8583418.
2 Yi Yang, Qi Gu, Ben-Gong Zhang, Ya-Zhou Shi* and Zhi-Gang Shao. A novel knowledge-based potential for RNA 3D structure evaluation. Chin. Phys. B. 2018, 27(3) 038701.
3 Ben-Gong Zhang, Ya-Zhou Shi*, 3D structure stability of RNA hairpin controlled by loop size. IEEE 29th Chinese Control And Decision Conference (CCDC). 2017, 6821-6825.
4 Ben-Gong Zhang, Weibo Li, Ya-Zhou Shi, Xiaoping Liu and Luonan Chen, Detecting causality from short time-series data based on prediction of topologically equivalent attractors. BMC Systems Biology. 2017, 11 128.
5 Lei Bao, Xi Zhang, Ya-Zhou Shi, Yuan-Yan Wu, Zhi-Jie Tan*, Understanding the relative flexibility of RNA and DNA duplexes: stretching and twist-stretch coupling. Biophysics Journal. 2017, 6 1094-1104.
6 Xi Zhang, Jin-Si Zhang, Ya-Zhou Shi, Xiao-Long Zhu, and Zhi-Jie Tan*, Potential of mean force between like-charged nanoparticles: Many-body effect. Scientific Reports. 2016; 6 23434.
7 Ya-Zhou Shi, Lei Jin, Feng-Hua Wang, Xiao-Long Zhu, and Zhi-Jie Tan*, Predicting 3D structure, flexibility and stability of RNA hairpins in monovalent and divalent ion solutions. Biophysics Journal. 2015; 109 2654-2665.
8 Zhi-Jie Tan*, Wenbing Zhang*, Ya-Zhou Shi, and Feng-Hua Wang, RNA Folding: Structure Prediction, Folding Kinetics and Ion Electrostatics. Advances in Experimental Medicine and biology 2015; 827, 143-183 (Book Chapter invited).
9 Ya-Zhou Shi, Feng-Hua Wang, Yuan-Yan Wu, Zhi-Jie Tan*, A coarse-grained model with implicit salt for RNAs: predicting 3D structure, stability and salt effect. The Journal of Chemical Physics. 2014; 141(10) 105102.
10 Shi Ya-Zhou, Wu Yuan-Yan, Wang Feng-Hua, Tan Zhi-Jie*, RNA structure prediction: Progress and perspective. Chinese Physics B 2014; 23(7) 078701.
Funding:
1 (NSFC) Predicting 3D structure and stability for RNA “kissing” complex. No. 11605125, 2017.01-2019.12 ￥20,0000
2 Hubei Ministry of Education, Predicting sequence effect on 3D stability of RNA pseudoknots. No. Q20171607，2017.01-2018.12，￥2,0000
